Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 EGLN1P1-201ENST00000531623 762 ntBASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 KRT8P9-201ENST00000558927 1449 ntBASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 CYP2D8P-201ENST00000433633 1490 ntBASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCSER1Q9C0I3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 WWOX-216ENST00000569818 525 ntBASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 AC010653.2-201ENST00000623505 997 ntBASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 MYLKP1-201ENST00000509077 1580 ntBASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.93■□□□□ 0.94
CCSER1Q9C0I3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 BX088651.1-201ENST00000540551 451 ntBASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 AC010947.1-201ENST00000623454 693 ntBASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 BICD1-207ENST00000551848 1962 ntBASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCSER1Q9C0I3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 MMP23A-201ENST00000234610 1017 ntBASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 AP000593.1-201ENST00000393668 712 ntBASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 CR769767.2-201ENST00000622735 460 ntBASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCSER1Q9C0I3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 AC036111.1-201ENST00000533973 1582 ntBASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 INGX-201ENST00000359239 846 ntBASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.9■□□□□ 0.94
CCSER1Q9C0I3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms