Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 WWOX-216ENST00000569818 525 ntBASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCM2Q9BSQ5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 AC036111.1-201ENST00000533973 1582 ntBASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 AC093525.10-201ENST00000625130 1569 ntBASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 TERF1P1-201ENST00000311003 1181 ntBASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 MIR564-202ENST00000385049 94 ntBASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 AC005521.1-201ENST00000393351 872 ntBASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 AC004408.2-201ENST00000623613 2777 ntBASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.4■□□□□ 0.54
CCM2Q9BSQ5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.39■□□□□ 0.54
CCM2Q9BSQ5 AL357033.4-201ENST00000617703 1807 ntBASIC18.39■□□□□ 0.54
CCM2Q9BSQ5 CROCCP3-202ENST00000420820 1947 ntBASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 AC092865.7-201ENST00000641832 219 ntBASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCM2Q9BSQ5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 AC010203.1-204ENST00000548782 407 ntBASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 AC073508.3-201ENST00000619697 1419 ntBASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCM2Q9BSQ5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 AL138966.2-201ENST00000621997 464 ntBASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.37■□□□□ 0.53
CCM2Q9BSQ5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms