Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 KRT18P68-201ENST00000392293 1000 ntBASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 AC004911.1-201ENST00000416316 871 ntBASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMP6Q96FZ7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMP6Q96FZ7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMP6Q96FZ7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP6Q96FZ7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMP6Q96FZ7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP6Q96FZ7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP6Q96FZ7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP6Q96FZ7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.83■□□□□ 0.61
CHMP6Q96FZ7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP6Q96FZ7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP6Q96FZ7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP6Q96FZ7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP6Q96FZ7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 AC005181.1-201ENST00000604782 1256 ntBASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP6Q96FZ7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms