Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 AC093787.1-201ENST00000450396 207 ntBASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 AC005181.1-201ENST00000604782 1256 ntBASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNIH3Q8TBE1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 AC093677.2-201ENST00000600169 1863 ntBASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 MIR6821-201ENST00000617625 74 ntBASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 AC084018.2-201ENST00000613093 2607 ntBASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CNIH3Q8TBE1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 AC073210.2-201ENST00000430369 194 ntBASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 AC137761.2-201ENST00000561729 223 ntBASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 AC145350.3-201ENST00000569033 163 ntBASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 OR10C1-204ENST00000622521 1039 ntBASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 AC124067.4-201ENST00000519691 2379 ntBASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNIH3Q8TBE1 TNRC18P3-201ENST00000441896 2691 ntBASIC17.08■□□□□ 0.33
CNIH3Q8TBE1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNIH3Q8TBE1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNIH3Q8TBE1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNIH3Q8TBE1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNIH3Q8TBE1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNIH3Q8TBE1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CNIH3Q8TBE1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNIH3Q8TBE1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms