Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIMC1Q8NDZ2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 MIR1224-201ENST00000408193 85 ntBASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 AL512353.2-201ENST00000448759 1962 ntBASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 CYP2D8P-201ENST00000433633 1490 ntBASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIMC1Q8NDZ2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 FITM1-202ENST00000559294 800 ntBASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 AC073912.3-201ENST00000624414 853 ntBASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIMC1Q8NDZ2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 INGX-201ENST00000359239 846 ntBASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 AP005242.2-201ENST00000580065 1175 ntBASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 KRT8P3-201ENST00000519669 1449 ntBASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIMC1Q8NDZ2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms