Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC89Q8N998 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 NOC2LP2-201ENST00000407594 1944 ntBASIC19.44■□□□□ 0.7
CCDC89Q8N998 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC89Q8N998 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC89Q8N998 AC126763.1-201ENST00000552015 2118 ntBASIC19.43■□□□□ 0.7
CCDC89Q8N998 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 HEIH-201ENST00000623091 1652 ntBASIC19.43■□□□□ 0.7
CCDC89Q8N998 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 Z85996.1-201ENST00000494644 937 ntBASIC19.43■□□□□ 0.7
CCDC89Q8N998 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 AL162741.1-201ENST00000565563 1558 ntBASIC19.43■□□□□ 0.7
CCDC89Q8N998 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC89Q8N998 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC89Q8N998 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC89Q8N998 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC89Q8N998 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC89Q8N998 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.42■□□□□ 0.7
CCDC89Q8N998 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC89Q8N998 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC89Q8N998 AL133373.2-201ENST00000623187 2828 ntBASIC19.42■□□□□ 0.7
CCDC89Q8N998 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
CCDC89Q8N998 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC89Q8N998 ESRRAP1-201ENST00000400596 1257 ntBASIC19.42■□□□□ 0.7
CCDC89Q8N998 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC89Q8N998 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC89Q8N998 KRT18P6-201ENST00000555540 1265 ntBASIC19.42■□□□□ 0.7
CCDC89Q8N998 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC89Q8N998 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC89Q8N998 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC89Q8N998 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC89Q8N998 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC89Q8N998 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC89Q8N998 AC005332.8-201ENST00000622750 2735 ntBASIC19.42■□□□□ 0.7
CCDC89Q8N998 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC89Q8N998 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC89Q8N998 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC89Q8N998 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC89Q8N998 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC89Q8N998 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 AC124016.1-201ENST00000609552 612 ntBASIC19.41■□□□□ 0.7
CCDC89Q8N998 AL445675.2-201ENST00000620291 557 ntBASIC19.41■□□□□ 0.7
CCDC89Q8N998 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC89Q8N998 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC89Q8N998 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms