Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LINC01561Q8N1V8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 AC008764.6-201ENST00000595909 2069 ntBASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 KRT18P41-201ENST00000518924 1277 ntBASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LINC01561Q8N1V8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 AC133041.1-202ENST00000642053 222 ntBASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 AC068880.1-201ENST00000507289 2297 ntBASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.56□□□□□ -0.4
LINC01561Q8N1V8 OR6D1P-202ENST00000641007 5290 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms