Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CROCCP3Q8IVE0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 IRX1P1-201ENST00000438849 1838 ntBASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CROCCP3Q8IVE0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 CROCCP1-201ENST00000426910 5675 ntBASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 CYP21A1P-202ENST00000354927 1481 ntBASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CROCCP3Q8IVE0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CROCCP3Q8IVE0 EDA-201ENST00000338901 1233 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms