Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC23.14■■□□□ 1.3
CHD1LQ86WJ1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 AC112777.1-201ENST00000540175 1423 ntBASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
CHD1LQ86WJ1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 AC097488.1-201ENST00000507834 756 ntBASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 AP001412.1-201ENST00000608405 714 ntBASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC23.13■■□□□ 1.29
CHD1LQ86WJ1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 AL023284.2-201ENST00000405850 579 ntBASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.12■■□□□ 1.29
CHD1LQ86WJ1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 MYC-208ENST00000641036 567 ntBASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 GPAT2P1-201ENST00000444924 1672 ntBASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHD1LQ86WJ1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD1LQ86WJ1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms