Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
CASC1Q6TDU7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
CASC1Q6TDU7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CASC1Q6TDU7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.9■■□□□ 1.26
CASC1Q6TDU7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CASC1Q6TDU7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CASC1Q6TDU7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CASC1Q6TDU7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CASC1Q6TDU7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.89■■□□□ 1.26
CASC1Q6TDU7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CASC1Q6TDU7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CASC1Q6TDU7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CASC1Q6TDU7 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.89■■□□□ 1.26
CASC1Q6TDU7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.26
CASC1Q6TDU7 OR6D1P-202ENST00000641007 5290 ntBASIC22.89■■□□□ 1.26
CASC1Q6TDU7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 AL158047.1-201ENST00000445918 881 ntBASIC22.89■■□□□ 1.25
CASC1Q6TDU7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 AC091390.4-202ENST00000476426 537 ntBASIC22.89■■□□□ 1.25
CASC1Q6TDU7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 KRT8P3-201ENST00000519669 1449 ntBASIC22.89■■□□□ 1.25
CASC1Q6TDU7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
CASC1Q6TDU7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 GCSHP5-201ENST00000443090 522 ntBASIC22.88■■□□□ 1.25
CASC1Q6TDU7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 CR392000.1-201ENST00000624770 1228 ntBASIC22.88■■□□□ 1.25
CASC1Q6TDU7 AC068587.9-201ENST00000641814 219 ntBASIC22.88■■□□□ 1.25
CASC1Q6TDU7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CASC1Q6TDU7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
CASC1Q6TDU7 AC073592.3-201ENST00000625118 1834 ntBASIC22.87■■□□□ 1.25
CASC1Q6TDU7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CASC1Q6TDU7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
CASC1Q6TDU7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CASC1Q6TDU7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CASC1Q6TDU7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CASC1Q6TDU7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CASC1Q6TDU7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.87■■□□□ 1.25
CASC1Q6TDU7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.87■■□□□ 1.25
CASC1Q6TDU7 MYC-208ENST00000641036 567 ntBASIC22.87■■□□□ 1.25
CASC1Q6TDU7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CASC1Q6TDU7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.87■■□□□ 1.25
CASC1Q6TDU7 AL390961.4-201ENST00000623958 2535 ntBASIC22.86■■□□□ 1.25
CASC1Q6TDU7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 KRT8P32-201ENST00000512863 1461 ntBASIC22.86■■□□□ 1.25
CASC1Q6TDU7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.86■■□□□ 1.25
CASC1Q6TDU7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms