Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
REEP3Q6NUK4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
REEP3Q6NUK4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
REEP3Q6NUK4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
REEP3Q6NUK4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 AC004951.3-201ENST00000418645 1148 ntBASIC17.47■□□□□ 0.39
REEP3Q6NUK4 AC091390.4-202ENST00000476426 537 ntBASIC17.47■□□□□ 0.39
REEP3Q6NUK4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 AC073648.6-201ENST00000641589 218 ntBASIC17.47■□□□□ 0.39
REEP3Q6NUK4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 AL499627.1-201ENST00000569373 2188 ntBASIC17.47■□□□□ 0.39
REEP3Q6NUK4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
REEP3Q6NUK4 HTR7P1-201ENST00000538670 1336 ntBASIC17.47■□□□□ 0.39
REEP3Q6NUK4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 RPS2P4-201ENST00000476944 856 ntBASIC17.46■□□□□ 0.39
REEP3Q6NUK4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
REEP3Q6NUK4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.38
REEP3Q6NUK4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
REEP3Q6NUK4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 AL353807.1-201ENST00000427475 662 ntBASIC17.45■□□□□ 0.38
REEP3Q6NUK4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
REEP3Q6NUK4 AC006058.3-201ENST00000606217 1069 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms