Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF43Q68DV7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 HMGA1P5-201ENST00000412453 271 ntBASIC19.62■□□□□ 0.73
RNF43Q68DV7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 TSPY17P-201ENST00000450329 467 ntBASIC19.62■□□□□ 0.73
RNF43Q68DV7 AC022616.7-201ENST00000525383 220 ntBASIC19.62■□□□□ 0.73
RNF43Q68DV7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 KRT126P-201ENST00000549467 1181 ntBASIC19.62■□□□□ 0.73
RNF43Q68DV7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RNF43Q68DV7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF43Q68DV7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.61■□□□□ 0.73
RNF43Q68DV7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF43Q68DV7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF43Q68DV7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 BX664615.1-201ENST00000443558 458 ntBASIC19.6■□□□□ 0.73
RNF43Q68DV7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF43Q68DV7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF43Q68DV7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF43Q68DV7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RNF43Q68DV7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF43Q68DV7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF43Q68DV7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
RNF43Q68DV7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF43Q68DV7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF43Q68DV7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms