Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
GABREP78334 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 KRT8P3-201ENST00000519669 1449 ntBASIC17.79■□□□□ 0.44
GABREP78334 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.79■□□□□ 0.44
GABREP78334 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
GABREP78334 AC112907.3-201ENST00000577781 2400 ntBASIC17.79■□□□□ 0.44
GABREP78334 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.79■□□□□ 0.44
GABREP78334 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
GABREP78334 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.78■□□□□ 0.44
GABREP78334 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
GABREP78334 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GABREP78334 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.78■□□□□ 0.44
GABREP78334 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 AC106795.1-205ENST00000512851 1056 ntBASIC17.78■□□□□ 0.44
GABREP78334 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.78■□□□□ 0.44
GABREP78334 AC090616.6-201ENST00000582640 721 ntBASIC17.78■□□□□ 0.44
GABREP78334 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 IGHV3-41-201ENST00000613121 348 ntBASIC17.78■□□□□ 0.44
GABREP78334 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.78■□□□□ 0.44
GABREP78334 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.78■□□□□ 0.44
GABREP78334 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GABREP78334 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
GABREP78334 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.78■□□□□ 0.44
GABREP78334 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
GABREP78334 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.77■□□□□ 0.44
GABREP78334 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
GABREP78334 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 AP000593.1-201ENST00000393668 712 ntBASIC17.77■□□□□ 0.44
GABREP78334 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.77■□□□□ 0.44
GABREP78334 KRT18P23-201ENST00000435622 1283 ntBASIC17.77■□□□□ 0.44
GABREP78334 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.77■□□□□ 0.44
GABREP78334 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.77■□□□□ 0.44
GABREP78334 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.77■□□□□ 0.44
GABREP78334 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
GABREP78334 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.77■□□□□ 0.44
GABREP78334 AL121912.1-201ENST00000603683 238 ntBASIC17.77■□□□□ 0.44
GABREP78334 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
GABREP78334 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
GABREP78334 LINC00167-201ENST00000530583 1419 ntBASIC17.77■□□□□ 0.44
GABREP78334 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GABREP78334 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GABREP78334 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.77■□□□□ 0.43
GABREP78334 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GABREP78334 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
GABREP78334 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GABREP78334 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.76■□□□□ 0.43
GABREP78334 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.76■□□□□ 0.43
GABREP78334 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GABREP78334 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.76■□□□□ 0.43
GABREP78334 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.76■□□□□ 0.43
GABREP78334 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.76■□□□□ 0.43
GABREP78334 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.76■□□□□ 0.43
GABREP78334 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
GABREP78334 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
GABREP78334 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.76■□□□□ 0.43
GABREP78334 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.76■□□□□ 0.43
GABREP78334 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.76■□□□□ 0.43
GABREP78334 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
GABREP78334 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.76■□□□□ 0.43
GABREP78334 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.76■□□□□ 0.43
GABREP78334 AP003733.1-201ENST00000491725 852 ntBASIC17.76■□□□□ 0.43
GABREP78334 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GABREP78334 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms