Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.9■□□□□ 0.62
WNT3AP56704 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
WNT3AP56704 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.9■□□□□ 0.62
WNT3AP56704 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.9■□□□□ 0.62
WNT3AP56704 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
WNT3AP56704 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
WNT3AP56704 TSPY14P-201ENST00000303979 915 ntBASIC18.9■□□□□ 0.62
WNT3AP56704 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.9■□□□□ 0.62
WNT3AP56704 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.9■□□□□ 0.62
WNT3AP56704 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.9■□□□□ 0.62
WNT3AP56704 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.9■□□□□ 0.62
WNT3AP56704 EGLN1P1-201ENST00000531623 762 ntBASIC18.9■□□□□ 0.62
WNT3AP56704 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.9■□□□□ 0.62
WNT3AP56704 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 AC010947.1-201ENST00000623454 693 ntBASIC18.9■□□□□ 0.62
WNT3AP56704 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
WNT3AP56704 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.9■□□□□ 0.62
WNT3AP56704 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
WNT3AP56704 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
WNT3AP56704 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.9■□□□□ 0.62
WNT3AP56704 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
WNT3AP56704 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
WNT3AP56704 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
WNT3AP56704 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.89■□□□□ 0.62
WNT3AP56704 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
WNT3AP56704 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.62
WNT3AP56704 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
WNT3AP56704 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
WNT3AP56704 AC020763.4-201ENST00000623414 4170 ntBASIC18.89■□□□□ 0.61
WNT3AP56704 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 INGX-201ENST00000359239 846 ntBASIC18.89■□□□□ 0.61
WNT3AP56704 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
WNT3AP56704 MIR564-202ENST00000385049 94 ntBASIC18.89■□□□□ 0.61
WNT3AP56704 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.89■□□□□ 0.61
WNT3AP56704 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 AC007663.1-201ENST00000438948 1240 ntBASIC18.89■□□□□ 0.61
WNT3AP56704 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.89■□□□□ 0.61
WNT3AP56704 BX088651.1-201ENST00000540551 451 ntBASIC18.89■□□□□ 0.61
WNT3AP56704 NAPSB-206ENST00000562112 1266 ntBASIC18.89■□□□□ 0.61
WNT3AP56704 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 AC104581.1-202ENST00000635932 2618 ntBASIC18.89■□□□□ 0.61
WNT3AP56704 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 AC005082.1-201ENST00000413042 2259 ntBASIC18.89■□□□□ 0.61
WNT3AP56704 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
WNT3AP56704 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.88■□□□□ 0.61
WNT3AP56704 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.88■□□□□ 0.61
WNT3AP56704 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.88■□□□□ 0.61
WNT3AP56704 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.88■□□□□ 0.61
WNT3AP56704 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
WNT3AP56704 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.88■□□□□ 0.61
WNT3AP56704 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
WNT3AP56704 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
WNT3AP56704 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.88■□□□□ 0.61
WNT3AP56704 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.88■□□□□ 0.61
WNT3AP56704 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
WNT3AP56704 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
WNT3AP56704 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
WNT3AP56704 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
WNT3AP56704 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
WNT3AP56704 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
WNT3AP56704 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
WNT3AP56704 AC126763.1-201ENST00000552015 2118 ntBASIC18.88■□□□□ 0.61
WNT3AP56704 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.87■□□□□ 0.61
WNT3AP56704 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.87■□□□□ 0.61
WNT3AP56704 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
WNT3AP56704 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.87■□□□□ 0.61
WNT3AP56704 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.87■□□□□ 0.61
WNT3AP56704 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
WNT3AP56704 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms