Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDE1AP54750 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.87■■□□□ 1.25
PDE1AP54750 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.87■■□□□ 1.25
PDE1AP54750 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE1AP54750 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PDE1AP54750 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDE1AP54750 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE1AP54750 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE1AP54750 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PDE1AP54750 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE1AP54750 AC007663.1-201ENST00000438948 1240 ntBASIC22.86■■□□□ 1.25
PDE1AP54750 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
PDE1AP54750 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE1AP54750 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE1AP54750 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE1AP54750 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PDE1AP54750 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE1AP54750 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PDE1AP54750 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.85■■□□□ 1.25
PDE1AP54750 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE1AP54750 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.85■■□□□ 1.25
PDE1AP54750 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
PDE1AP54750 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE1AP54750 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE1AP54750 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE1AP54750 AC112777.1-201ENST00000540175 1423 ntBASIC22.85■■□□□ 1.25
PDE1AP54750 TSPY14P-201ENST00000303979 915 ntBASIC22.85■■□□□ 1.25
PDE1AP54750 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.85■■□□□ 1.25
PDE1AP54750 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.85■■□□□ 1.25
PDE1AP54750 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.85■■□□□ 1.25
PDE1AP54750 AC010947.1-201ENST00000623454 693 ntBASIC22.85■■□□□ 1.25
PDE1AP54750 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDE1AP54750 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE1AP54750 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE1AP54750 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.85■■□□□ 1.25
PDE1AP54750 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE1AP54750 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDE1AP54750 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDE1AP54750 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE1AP54750 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PDE1AP54750 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PDE1AP54750 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE1AP54750 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE1AP54750 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE1AP54750 C2orf69P3-201ENST00000565542 1120 ntBASIC22.84■■□□□ 1.25
PDE1AP54750 MIR3180-5-201ENST00000583743 153 ntBASIC22.84■■□□□ 1.25
PDE1AP54750 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.84■■□□□ 1.25
PDE1AP54750 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
PDE1AP54750 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDE1AP54750 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.83■■□□□ 1.25
PDE1AP54750 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
PDE1AP54750 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
PDE1AP54750 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.83■■□□□ 1.25
PDE1AP54750 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
PDE1AP54750 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.83■■□□□ 1.25
PDE1AP54750 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDE1AP54750 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.83■■□□□ 1.25
PDE1AP54750 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC22.83■■□□□ 1.25
PDE1AP54750 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.83■■□□□ 1.25
PDE1AP54750 CCR12P-201ENST00000446203 998 ntBASIC22.83■■□□□ 1.25
PDE1AP54750 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDE1AP54750 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.83■■□□□ 1.25
PDE1AP54750 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.83■■□□□ 1.25
PDE1AP54750 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.83■■□□□ 1.25
PDE1AP54750 AC036111.1-201ENST00000533973 1582 ntBASIC22.83■■□□□ 1.25
PDE1AP54750 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PDE1AP54750 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC22.83■■□□□ 1.24
PDE1AP54750 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PDE1AP54750 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PDE1AP54750 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PDE1AP54750 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
PDE1AP54750 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PDE1AP54750 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PDE1AP54750 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PDE1AP54750 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE1AP54750 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PDE1AP54750 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE1AP54750 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
PDE1AP54750 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE1AP54750 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.82■■□□□ 1.24
PDE1AP54750 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PDE1AP54750 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE1AP54750 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE1AP54750 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.82■■□□□ 1.24
PDE1AP54750 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PDE1AP54750 MMP23A-201ENST00000234610 1017 ntBASIC22.82■■□□□ 1.24
PDE1AP54750 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
PDE1AP54750 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE1AP54750 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.82■■□□□ 1.24
PDE1AP54750 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.82■■□□□ 1.24
PDE1AP54750 EGLN1P1-201ENST00000531623 762 ntBASIC22.82■■□□□ 1.24
PDE1AP54750 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.82■■□□□ 1.24
PDE1AP54750 AC116562.4-202ENST00000641738 218 ntBASIC22.82■■□□□ 1.24
PDE1AP54750 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22.82■■□□□ 1.24
PDE1AP54750 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE1AP54750 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
PDE1AP54750 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDE1AP54750 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PDE1AP54750 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PDE1AP54750 BICD1-207ENST00000551848 1962 ntBASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms