Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.09■□□□□ 0.97
CIITAP33076 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CIITAP33076 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.09■□□□□ 0.97
CIITAP33076 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.09■□□□□ 0.97
CIITAP33076 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CIITAP33076 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CIITAP33076 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.09■□□□□ 0.97
CIITAP33076 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CIITAP33076 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CIITAP33076 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.08■□□□□ 0.97
CIITAP33076 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CIITAP33076 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CIITAP33076 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CIITAP33076 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.08■□□□□ 0.97
CIITAP33076 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CIITAP33076 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CIITAP33076 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CIITAP33076 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CIITAP33076 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CIITAP33076 KRT18P38-201ENST00000449496 1282 ntBASIC21.08■□□□□ 0.97
CIITAP33076 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.08■□□□□ 0.97
CIITAP33076 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.08■□□□□ 0.97
CIITAP33076 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CIITAP33076 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.08■□□□□ 0.97
CIITAP33076 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CIITAP33076 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.08■□□□□ 0.97
CIITAP33076 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CIITAP33076 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CIITAP33076 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.08■□□□□ 0.96
CIITAP33076 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CIITAP33076 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CIITAP33076 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CIITAP33076 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CIITAP33076 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.08■□□□□ 0.96
CIITAP33076 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.08■□□□□ 0.96
CIITAP33076 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CIITAP33076 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
CIITAP33076 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CIITAP33076 CROCCP3-202ENST00000420820 1947 ntBASIC21.08■□□□□ 0.96
CIITAP33076 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CIITAP33076 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
CIITAP33076 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 KRT8P50-201ENST00000562022 1438 ntBASIC21.07■□□□□ 0.96
CIITAP33076 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.07■□□□□ 0.96
CIITAP33076 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CIITAP33076 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.07■□□□□ 0.96
CIITAP33076 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.07■□□□□ 0.96
CIITAP33076 MIR3180-4-201ENST00000582223 153 ntBASIC21.07■□□□□ 0.96
CIITAP33076 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.07■□□□□ 0.96
CIITAP33076 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CIITAP33076 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.07■□□□□ 0.96
CIITAP33076 AL031598.1-201ENST00000561511 1773 ntBASIC21.07■□□□□ 0.96
CIITAP33076 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CIITAP33076 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CIITAP33076 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.07■□□□□ 0.96
CIITAP33076 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CIITAP33076 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.06■□□□□ 0.96
CIITAP33076 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CIITAP33076 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
CIITAP33076 AC018445.3-201ENST00000624177 1945 ntBASIC21.06■□□□□ 0.96
CIITAP33076 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.06■□□□□ 0.96
CIITAP33076 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CIITAP33076 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.06■□□□□ 0.96
CIITAP33076 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CIITAP33076 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CIITAP33076 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.06■□□□□ 0.96
CIITAP33076 LINC01238-205ENST00000567549 1107 ntBASIC21.06■□□□□ 0.96
CIITAP33076 MIR3917-201ENST00000580971 93 ntBASIC21.06■□□□□ 0.96
CIITAP33076 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.06■□□□□ 0.96
CIITAP33076 NTF6B-201ENST00000591913 560 ntBASIC21.06■□□□□ 0.96
CIITAP33076 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.06■□□□□ 0.96
CIITAP33076 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CIITAP33076 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CIITAP33076 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CIITAP33076 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CIITAP33076 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CIITAP33076 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.06■□□□□ 0.96
CIITAP33076 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CIITAP33076 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CIITAP33076 AP000974.1-201ENST00000623909 2387 ntBASIC21.05■□□□□ 0.96
CIITAP33076 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.05■□□□□ 0.96
CIITAP33076 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CIITAP33076 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CIITAP33076 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
CIITAP33076 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CIITAP33076 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CIITAP33076 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CIITAP33076 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CIITAP33076 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CIITAP33076 AP000593.1-201ENST00000393668 712 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms