Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
GDF1P27539 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDF1P27539 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDF1P27539 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GDF1P27539 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDF1P27539 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDF1P27539 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
GDF1P27539 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDF1P27539 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDF1P27539 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDF1P27539 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDF1P27539 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDF1P27539 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
GDF1P27539 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.97■□□□□ 0.31
GDF1P27539 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.97■□□□□ 0.31
GDF1P27539 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.97■□□□□ 0.31
GDF1P27539 AC034232.1-201ENST00000506026 1064 ntBASIC16.97■□□□□ 0.31
GDF1P27539 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.97■□□□□ 0.31
GDF1P27539 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
GDF1P27539 AC112497.1-201ENST00000624824 639 ntBASIC16.97■□□□□ 0.31
GDF1P27539 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.97■□□□□ 0.31
GDF1P27539 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GDF1P27539 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.97■□□□□ 0.31
GDF1P27539 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDF1P27539 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDF1P27539 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GDF1P27539 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GDF1P27539 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GDF1P27539 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
GDF1P27539 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GDF1P27539 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GDF1P27539 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.96■□□□□ 0.31
GDF1P27539 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GDF1P27539 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDF1P27539 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDF1P27539 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDF1P27539 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDF1P27539 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
GDF1P27539 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDF1P27539 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
GDF1P27539 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GDF1P27539 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GDF1P27539 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.96■□□□□ 0.31
GDF1P27539 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.96■□□□□ 0.31
GDF1P27539 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.96■□□□□ 0.31
GDF1P27539 AL671277.2-201ENST00000458060 996 ntBASIC16.96■□□□□ 0.31
GDF1P27539 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.96■□□□□ 0.31
GDF1P27539 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDF1P27539 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.96■□□□□ 0.31
GDF1P27539 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.96■□□□□ 0.31
GDF1P27539 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.96■□□□□ 0.31
GDF1P27539 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.96■□□□□ 0.31
GDF1P27539 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.96■□□□□ 0.31
GDF1P27539 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDF1P27539 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.96■□□□□ 0.31
GDF1P27539 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GDF1P27539 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GDF1P27539 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GDF1P27539 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.96■□□□□ 0.3
GDF1P27539 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GDF1P27539 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.96■□□□□ 0.3
GDF1P27539 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 SLC25A24-204ENST00000569674 2357 ntBASIC16.95■□□□□ 0.3
GDF1P27539 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
GDF1P27539 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
GDF1P27539 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.95■□□□□ 0.3
GDF1P27539 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.95■□□□□ 0.3
GDF1P27539 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.95■□□□□ 0.3
GDF1P27539 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.95■□□□□ 0.3
GDF1P27539 KRT18P38-201ENST00000449496 1282 ntBASIC16.95■□□□□ 0.3
GDF1P27539 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.95■□□□□ 0.3
GDF1P27539 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.95■□□□□ 0.3
GDF1P27539 MYC-208ENST00000641036 567 ntBASIC16.95■□□□□ 0.3
GDF1P27539 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GDF1P27539 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GDF1P27539 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GDF1P27539 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.95■□□□□ 0.3
GDF1P27539 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.95■□□□□ 0.3
GDF1P27539 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDF1P27539 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms