Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
FREM3P0C091 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.99■□□□□ 0.31
FREM3P0C091 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.99■□□□□ 0.31
FREM3P0C091 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.99■□□□□ 0.31
FREM3P0C091 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
FREM3P0C091 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
FREM3P0C091 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.99■□□□□ 0.31
FREM3P0C091 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
FREM3P0C091 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.99■□□□□ 0.31
FREM3P0C091 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
FREM3P0C091 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FREM3P0C091 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.98■□□□□ 0.31
FREM3P0C091 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 AC099343.3-201ENST00000605834 2503 ntBASIC16.98■□□□□ 0.31
FREM3P0C091 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
FREM3P0C091 FEM1AP3-201ENST00000403722 1741 ntBASIC16.98■□□□□ 0.31
FREM3P0C091 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.98■□□□□ 0.31
FREM3P0C091 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.98■□□□□ 0.31
FREM3P0C091 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.98■□□□□ 0.31
FREM3P0C091 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.98■□□□□ 0.31
FREM3P0C091 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.98■□□□□ 0.31
FREM3P0C091 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.98■□□□□ 0.31
FREM3P0C091 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 NEFHP1-201ENST00000412845 2629 ntBASIC16.98■□□□□ 0.31
FREM3P0C091 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
FREM3P0C091 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 ARMC10P1-201ENST00000313754 855 ntBASIC16.97■□□□□ 0.31
FREM3P0C091 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.97■□□□□ 0.31
FREM3P0C091 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
FREM3P0C091 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.97■□□□□ 0.31
FREM3P0C091 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
FREM3P0C091 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
FREM3P0C091 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
FREM3P0C091 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
FREM3P0C091 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
FREM3P0C091 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
FREM3P0C091 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.97■□□□□ 0.31
FREM3P0C091 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.97■□□□□ 0.31
FREM3P0C091 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
FREM3P0C091 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.97■□□□□ 0.31
FREM3P0C091 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FREM3P0C091 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FREM3P0C091 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FREM3P0C091 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.96■□□□□ 0.31
FREM3P0C091 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FREM3P0C091 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FREM3P0C091 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.96■□□□□ 0.31
FREM3P0C091 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
FREM3P0C091 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.96■□□□□ 0.31
FREM3P0C091 AP000523.1-201ENST00000398242 1049 ntBASIC16.96■□□□□ 0.31
FREM3P0C091 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.96■□□□□ 0.31
FREM3P0C091 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.96■□□□□ 0.31
FREM3P0C091 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.96■□□□□ 0.31
FREM3P0C091 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.96■□□□□ 0.31
FREM3P0C091 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
FREM3P0C091 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FREM3P0C091 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
FREM3P0C091 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.96■□□□□ 0.31
FREM3P0C091 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.96■□□□□ 0.31
FREM3P0C091 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FREM3P0C091 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms