Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.15■□□□□ 0.5
CNOT3O75175 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT3O75175 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CNOT3O75175 Z82202.1-201ENST00000623446 1880 ntBASIC18.15■□□□□ 0.5
CNOT3O75175 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.15■□□□□ 0.5
CNOT3O75175 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CNOT3O75175 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT3O75175 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.15■□□□□ 0.5
CNOT3O75175 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CNOT3O75175 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNOT3O75175 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CNOT3O75175 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CNOT3O75175 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.14■□□□□ 0.5
CNOT3O75175 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CNOT3O75175 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CNOT3O75175 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CNOT3O75175 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CNOT3O75175 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CNOT3O75175 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.14■□□□□ 0.49
CNOT3O75175 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CNOT3O75175 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.14■□□□□ 0.49
CNOT3O75175 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.14■□□□□ 0.49
CNOT3O75175 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.14■□□□□ 0.49
CNOT3O75175 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CNOT3O75175 AC093503.3-201ENST00000624917 2352 ntBASIC18.14■□□□□ 0.49
CNOT3O75175 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.14■□□□□ 0.49
CNOT3O75175 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CNOT3O75175 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CNOT3O75175 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CNOT3O75175 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT3O75175 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CNOT3O75175 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CNOT3O75175 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT3O75175 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT3O75175 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
CNOT3O75175 AL137013.1-201ENST00000432946 1228 ntBASIC18.13■□□□□ 0.49
CNOT3O75175 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.13■□□□□ 0.49
CNOT3O75175 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.13■□□□□ 0.49
CNOT3O75175 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT3O75175 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.13■□□□□ 0.49
CNOT3O75175 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT3O75175 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT3O75175 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.13■□□□□ 0.49
CNOT3O75175 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT3O75175 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CNOT3O75175 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CNOT3O75175 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.13■□□□□ 0.49
CNOT3O75175 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNOT3O75175 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CNOT3O75175 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CNOT3O75175 TREX1-205ENST00000625293 1783 ntBASIC18.12■□□□□ 0.49
CNOT3O75175 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT3O75175 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT3O75175 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT3O75175 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT3O75175 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT3O75175 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT3O75175 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT3O75175 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CNOT3O75175 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.12■□□□□ 0.49
CNOT3O75175 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT3O75175 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT3O75175 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT3O75175 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.12■□□□□ 0.49
CNOT3O75175 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CNOT3O75175 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.12■□□□□ 0.49
CNOT3O75175 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CNOT3O75175 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT3O75175 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.12■□□□□ 0.49
CNOT3O75175 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT3O75175 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT3O75175 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms