Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDC7O00311 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC7O00311 MFAP1P1-201ENST00000442257 1255 ntBASIC18.38■□□□□ 0.53
CDC7O00311 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.38■□□□□ 0.53
CDC7O00311 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC7O00311 AP001412.1-201ENST00000608405 714 ntBASIC18.38■□□□□ 0.53
CDC7O00311 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CDC7O00311 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDC7O00311 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC7O00311 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC7O00311 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.38■□□□□ 0.53
CDC7O00311 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDC7O00311 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.37■□□□□ 0.53
CDC7O00311 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC7O00311 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC7O00311 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC7O00311 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC7O00311 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.37■□□□□ 0.53
CDC7O00311 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC7O00311 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CDC7O00311 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC7O00311 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC7O00311 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC7O00311 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDC7O00311 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC7O00311 AC097488.1-201ENST00000507834 756 ntBASIC18.37■□□□□ 0.53
CDC7O00311 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.37■□□□□ 0.53
CDC7O00311 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC7O00311 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC7O00311 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC7O00311 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC7O00311 DGCR10-201ENST00000609839 495 ntBASIC18.37■□□□□ 0.53
CDC7O00311 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC7O00311 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC7O00311 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDC7O00311 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC7O00311 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC7O00311 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC7O00311 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDC7O00311 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CDC7O00311 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.36■□□□□ 0.53
CDC7O00311 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDC7O00311 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDC7O00311 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 AL355355.2-201ENST00000442321 338 ntBASIC18.36■□□□□ 0.53
CDC7O00311 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC7O00311 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC7O00311 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CDC7O00311 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC7O00311 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CDC7O00311 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC7O00311 BICD1-207ENST00000551848 1962 ntBASIC18.36■□□□□ 0.53
CDC7O00311 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC7O00311 AC026471.5-201ENST00000615068 467 ntBASIC18.36■□□□□ 0.53
CDC7O00311 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDC7O00311 AC073592.3-201ENST00000625118 1834 ntBASIC18.36■□□□□ 0.53
CDC7O00311 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
CDC7O00311 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDC7O00311 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC7O00311 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms