Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 NEFHP1-201ENST00000412845 2629 ntBASIC18.68■□□□□ 0.58
CFAP99D6REC4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.67■□□□□ 0.58
CFAP99D6REC4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.67■□□□□ 0.58
CFAP99D6REC4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 EGLN1P1-201ENST00000531623 762 ntBASIC18.67■□□□□ 0.58
CFAP99D6REC4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.67■□□□□ 0.58
CFAP99D6REC4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CFAP99D6REC4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 TSPY14P-201ENST00000303979 915 ntBASIC18.66■□□□□ 0.58
CFAP99D6REC4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.66■□□□□ 0.58
CFAP99D6REC4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 AC073912.3-201ENST00000624414 853 ntBASIC18.66■□□□□ 0.58
CFAP99D6REC4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CFAP99D6REC4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CFAP99D6REC4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.65■□□□□ 0.58
CFAP99D6REC4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CFAP99D6REC4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.65■□□□□ 0.58
CFAP99D6REC4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 AC083906.6-201ENST00000641366 219 ntBASIC18.65■□□□□ 0.58
CFAP99D6REC4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.65■□□□□ 0.58
CFAP99D6REC4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CFAP99D6REC4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.65■□□□□ 0.58
CFAP99D6REC4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.65■□□□□ 0.58
CFAP99D6REC4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CFAP99D6REC4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
CFAP99D6REC4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
CFAP99D6REC4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CFAP99D6REC4 AL512353.2-201ENST00000448759 1962 ntBASIC18.64■□□□□ 0.58
CFAP99D6REC4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CFAP99D6REC4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CFAP99D6REC4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms