Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 RBM17P1-201ENST00000453646 1190 ntBASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 NUDT16P1-203ENST00000513809 620 ntBASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SPDYE4A6NLX3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 CROCCP3-202ENST00000420820 1947 ntBASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 CR392000.1-201ENST00000624770 1228 ntBASIC21.08■□□□□ 0.97
SPDYE4A6NLX3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.96
SPDYE4A6NLX3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.08■□□□□ 0.96
SPDYE4A6NLX3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.08■□□□□ 0.96
SPDYE4A6NLX3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.08■□□□□ 0.96
SPDYE4A6NLX3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SPDYE4A6NLX3 AC090340.1-201ENST00000620778 4980 ntBASIC21.08■□□□□ 0.96
SPDYE4A6NLX3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SPDYE4A6NLX3 LINC01465-201ENST00000408887 1940 ntBASIC21.08■□□□□ 0.96
SPDYE4A6NLX3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 AL603841.1-201ENST00000430516 664 ntBASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 KRT18P35-201ENST00000510488 1269 ntBASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDYE4A6NLX3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 REXO1L10P-201ENST00000615707 1290 ntBASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 AL590326.2-201ENST00000625139 305 ntBASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.06■□□□□ 0.96
SPDYE4A6NLX3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms