Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 AC093677.2-201ENST00000600169 1863 ntBASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
DUXBA0A1W2PPF3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 AF201337.1-201ENST00000520239 748 ntBASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DUXBA0A1W2PPF3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DUXBA0A1W2PPF3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUXBA0A1W2PPF3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUXBA0A1W2PPF3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUXBA0A1W2PPF3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUXBA0A1W2PPF3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUXBA0A1W2PPF3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
DUXBA0A1W2PPF3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
DUXBA0A1W2PPF3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms