Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 MCCD1P1-208ENST00000445732 328 ntBASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AL020996.1-203ENST00000536896 2307 ntBASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AC112777.1-201ENST00000540175 1423 ntBASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 MTMR9LP-203ENST00000426597 1545 ntBASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV7-1A0A0A6YYK4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AP000525.1-201ENST00000608286 694 ntBASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV7-1A0A0A6YYK4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AC079598.2-202ENST00000546624 1451 ntBASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 MIR1238-201ENST00000408483 83 ntBASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AL355075.4-201ENST00000554988 638 ntBASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AC116562.4-202ENST00000641738 218 ntBASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV7-1A0A0A6YYK4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AL357033.4-201ENST00000617703 1807 ntBASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV7-1A0A0A6YYK4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms