Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 CR769767.2-201ENST00000622735 460 ntBASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TSSC4Q9Y5U2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 STARP1-201ENST00000397973 869 ntBASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 PCED1CP-201ENST00000419887 785 ntBASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 FZD10-202ENST00000539839 3282 ntBASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TSSC4Q9Y5U2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
TSSC4Q9Y5U2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
TSSC4Q9Y5U2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 IER3-202ENST00000376377 1350 ntBASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 AC034232.1-201ENST00000506026 1064 ntBASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 GCSHP2-201ENST00000560971 527 ntBASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 MIR4674-201ENST00000582457 87 ntBASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.64□□□□□ -0.07
TSSC4Q9Y5U2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms