Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 KRT17P1-201ENST00000399211 1546 ntBASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 LSM12P1-201ENST00000411836 588 ntBASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 AC073210.2-201ENST00000430369 194 ntBASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 AC012317.2-201ENST00000623305 2251 ntBASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 FAM201B-201ENST00000458407 597 ntBASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 AC124067.4-201ENST00000519691 2379 ntBASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB1Q9Y5G3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 TSPY6P-201ENST00000448518 926 ntBASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 MIR4651-201ENST00000582622 73 ntBASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 OR6D1P-202ENST00000641007 5290 ntBASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGB1Q9Y5G3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGB1Q9Y5G3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms