Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 AF186192.3-201ENST00000583427 947 ntBASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 FEM1AP3-201ENST00000403722 1741 ntBASIC17.81■□□□□ 0.44
PCDHGB3Q9Y5G1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 HTR7P1-201ENST00000538670 1336 ntBASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 AL445675.2-201ENST00000620291 557 ntBASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 AC131212.4-201ENST00000623606 975 ntBASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB3Q9Y5G1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 AL512353.2-201ENST00000448759 1962 ntBASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 TSPY7P-201ENST00000431358 1114 ntBASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 AP002982.1-201ENST00000492365 877 ntBASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 REXO1L12P-201ENST00000622156 912 ntBASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB3Q9Y5G1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms