Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 HLA-A-201ENST00000376802 1334 ntBASIC21.79■■□□□ 1.08
EFCC1Q9HA90 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EFCC1Q9HA90 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 GPAT2P1-201ENST00000444924 1672 ntBASIC21.78■■□□□ 1.08
EFCC1Q9HA90 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
EFCC1Q9HA90 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 TOB2P1-201ENST00000469761 992 ntBASIC21.77■■□□□ 1.08
EFCC1Q9HA90 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.77■■□□□ 1.08
EFCC1Q9HA90 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
EFCC1Q9HA90 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
EFCC1Q9HA90 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
EFCC1Q9HA90 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
EFCC1Q9HA90 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EFCC1Q9HA90 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 ZNF815P-204ENST00000434898 1737 ntBASIC21.75■■□□□ 1.07
EFCC1Q9HA90 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.75■■□□□ 1.07
EFCC1Q9HA90 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms