Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 AC073508.3-201ENST00000619697 1419 ntBASIC16.61■□□□□ 0.25
APH1AQ96BI3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 AP000523.1-201ENST00000398242 1049 ntBASIC16.6■□□□□ 0.25
APH1AQ96BI3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 WWOX-216ENST00000569818 525 ntBASIC16.6■□□□□ 0.25
APH1AQ96BI3 RN7SL850P-201ENST00000579959 291 ntBASIC16.6■□□□□ 0.25
APH1AQ96BI3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 AL138966.2-201ENST00000621997 464 ntBASIC16.6■□□□□ 0.25
APH1AQ96BI3 AC141257.4-201ENST00000634557 245 ntBASIC16.6■□□□□ 0.25
APH1AQ96BI3 AC136944.6-201ENST00000634818 245 ntBASIC16.6■□□□□ 0.25
APH1AQ96BI3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
APH1AQ96BI3 AC036111.1-201ENST00000533973 1582 ntBASIC16.6■□□□□ 0.25
APH1AQ96BI3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APH1AQ96BI3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 BX664615.1-201ENST00000443558 458 ntBASIC16.59■□□□□ 0.25
APH1AQ96BI3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
APH1AQ96BI3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APH1AQ96BI3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
APH1AQ96BI3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
APH1AQ96BI3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
APH1AQ96BI3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
APH1AQ96BI3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APH1AQ96BI3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APH1AQ96BI3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
APH1AQ96BI3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.58■□□□□ 0.24
APH1AQ96BI3 AC009947.2-201ENST00000444014 672 ntBASIC16.58■□□□□ 0.24
APH1AQ96BI3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.58■□□□□ 0.24
APH1AQ96BI3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.58■□□□□ 0.24
APH1AQ96BI3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
APH1AQ96BI3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms