Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.29■■□□□ 1
TNFRSF25Q93038 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF25Q93038 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.29■■□□□ 1
TNFRSF25Q93038 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF25Q93038 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.29■■□□□ 1
TNFRSF25Q93038 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF25Q93038 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF25Q93038 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF25Q93038 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF25Q93038 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.29■■□□□ 1
TNFRSF25Q93038 HOXB1-202ENST00000577092 1414 ntBASIC21.29■■□□□ 1
TNFRSF25Q93038 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF25Q93038 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TNFRSF25Q93038 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.28■■□□□ 1
TNFRSF25Q93038 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TNFRSF25Q93038 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 HMGA1P5-201ENST00000412453 271 ntBASIC21.28■■□□□ 1
TNFRSF25Q93038 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.28■■□□□ 1
TNFRSF25Q93038 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.28■■□□□ 1
TNFRSF25Q93038 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.28■■□□□ 1
TNFRSF25Q93038 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TNFRSF25Q93038 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.28■■□□□ 1
TNFRSF25Q93038 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.28■■□□□ 1
TNFRSF25Q93038 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.28■■□□□ 1
TNFRSF25Q93038 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF25Q93038 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF25Q93038 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.27■■□□□ 1
TNFRSF25Q93038 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.27■■□□□ 1
TNFRSF25Q93038 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
TNFRSF25Q93038 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF25Q93038 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF25Q93038 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF25Q93038 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF25Q93038 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF25Q93038 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF25Q93038 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.27■■□□□ 1
TNFRSF25Q93038 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.27■■□□□ 1
TNFRSF25Q93038 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.27■■□□□ 1
TNFRSF25Q93038 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF25Q93038 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.27■□□□□ 0.99
TNFRSF25Q93038 KRT18P22-201ENST00000402024 1347 ntBASIC21.27■□□□□ 0.99
TNFRSF25Q93038 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TNFRSF25Q93038 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TNFRSF25Q93038 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 AC090164.3-201ENST00000610780 2143 ntBASIC21.26■□□□□ 0.99
TNFRSF25Q93038 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 AL138966.2-201ENST00000621997 464 ntBASIC21.26■□□□□ 0.99
TNFRSF25Q93038 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 MYLKP1-201ENST00000509077 1580 ntBASIC21.26■□□□□ 0.99
TNFRSF25Q93038 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF25Q93038 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 AC133561.5-201ENST00000635547 218 ntBASIC21.25■□□□□ 0.99
TNFRSF25Q93038 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.25■□□□□ 0.99
TNFRSF25Q93038 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms