Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB3Q92617 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB3Q92617 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB3Q92617 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.81□□□□□ -0.04
NPIPB3Q92617 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB3Q92617 AC126763.1-201ENST00000552015 2118 ntBASIC14.81□□□□□ -0.04
NPIPB3Q92617 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 AL133373.2-201ENST00000623187 2828 ntBASIC14.81□□□□□ -0.04
NPIPB3Q92617 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.81□□□□□ -0.04
NPIPB3Q92617 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NPIPB3Q92617 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB3Q92617 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB3Q92617 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB3Q92617 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.81□□□□□ -0.04
NPIPB3Q92617 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB3Q92617 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB3Q92617 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB3Q92617 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB3Q92617 LETM1P2-201ENST00000597330 2178 ntBASIC14.8□□□□□ -0.04
NPIPB3Q92617 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB3Q92617 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB3Q92617 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 KRT17P3-201ENST00000420566 1262 ntBASIC14.8□□□□□ -0.04
NPIPB3Q92617 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB3Q92617 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB3Q92617 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB3Q92617 AC008403.3-201ENST00000598924 454 ntBASIC14.8□□□□□ -0.04
NPIPB3Q92617 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB3Q92617 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 KRT8P41-201ENST00000533985 1514 ntBASIC14.8□□□□□ -0.04
NPIPB3Q92617 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB3Q92617 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB3Q92617 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB3Q92617 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPB3Q92617 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB3Q92617 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
NPIPB3Q92617 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB3Q92617 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB3Q92617 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NPIPB3Q92617 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB3Q92617 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB3Q92617 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB3Q92617 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB3Q92617 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB3Q92617 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB3Q92617 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPB3Q92617 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPIPB3Q92617 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB3Q92617 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPIPB3Q92617 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.79□□□□□ -0.04
NPIPB3Q92617 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.79□□□□□ -0.04
NPIPB3Q92617 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms