Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 IRX1P1-201ENST00000438849 1838 ntBASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SH3RF2Q8TEC5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 AL109659.2-201ENST00000606809 1674 ntBASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SH3RF2Q8TEC5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 AC008556.1-201ENST00000610908 2040 ntBASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3RF2Q8TEC5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3RF2Q8TEC5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 AL645929.1-201ENST00000420084 975 ntBASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 HCG4P8-203ENST00000443049 980 ntBASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3RF2Q8TEC5 AL157888.1-201ENST00000631930 593 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms