Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
VPS8Q8N3P4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC29.3■■■□□ 2.28
VPS8Q8N3P4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
VPS8Q8N3P4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC29.29■■■□□ 2.28
VPS8Q8N3P4 AP000593.1-201ENST00000393668 712 ntBASIC29.29■■■□□ 2.28
VPS8Q8N3P4 AC116407.4-201ENST00000623319 1061 ntBASIC29.29■■■□□ 2.28
VPS8Q8N3P4 AL358472.4-201ENST00000633140 710 ntBASIC29.29■■■□□ 2.28
VPS8Q8N3P4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC29.29■■■□□ 2.28
VPS8Q8N3P4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC29.29■■■□□ 2.28
VPS8Q8N3P4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC29.29■■■□□ 2.28
VPS8Q8N3P4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC29.29■■■□□ 2.28
VPS8Q8N3P4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
VPS8Q8N3P4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
VPS8Q8N3P4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC29.29■■■□□ 2.28
VPS8Q8N3P4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC29.29■■■□□ 2.28
VPS8Q8N3P4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
VPS8Q8N3P4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 ANO7L1-203ENST00000602586 1720 ntBASIC29.28■■■□□ 2.28
VPS8Q8N3P4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 AL136038.3-201ENST00000561909 1096 ntBASIC29.28■■■□□ 2.28
VPS8Q8N3P4 AL136038.4-201ENST00000603606 1261 ntBASIC29.28■■■□□ 2.28
VPS8Q8N3P4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
VPS8Q8N3P4 AL031598.1-201ENST00000561511 1773 ntBASIC29.27■■■□□ 2.28
VPS8Q8N3P4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 CROCCP3-202ENST00000420820 1947 ntBASIC29.27■■■□□ 2.28
VPS8Q8N3P4 AL499627.1-201ENST00000569373 2188 ntBASIC29.27■■■□□ 2.28
VPS8Q8N3P4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 TK1-205ENST00000590862 642 ntTSL 3 BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC29.27■■■□□ 2.28
VPS8Q8N3P4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
VPS8Q8N3P4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
VPS8Q8N3P4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
VPS8Q8N3P4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
VPS8Q8N3P4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC29.26■■■□□ 2.27
VPS8Q8N3P4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
VPS8Q8N3P4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
VPS8Q8N3P4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
VPS8Q8N3P4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
VPS8Q8N3P4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC29.26■■■□□ 2.27
VPS8Q8N3P4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC29.26■■■□□ 2.27
VPS8Q8N3P4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC29.26■■■□□ 2.27
VPS8Q8N3P4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC29.26■■■□□ 2.27
VPS8Q8N3P4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 PVRIG2P-201ENST00000435460 978 ntBASIC29.25■■■□□ 2.27
VPS8Q8N3P4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
VPS8Q8N3P4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 AL391807.1-203ENST00000604392 2365 ntBASIC29.24■■■□□ 2.27
VPS8Q8N3P4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 DBP-204ENST00000599385 709 ntTSL 3 BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
VPS8Q8N3P4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
VPS8Q8N3P4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
VPS8Q8N3P4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
VPS8Q8N3P4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
VPS8Q8N3P4 AP000550.4-202ENST00000639755 178 ntBASIC29.23■■■□□ 2.27
VPS8Q8N3P4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC29.23■■■□□ 2.27
VPS8Q8N3P4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
VPS8Q8N3P4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC29.23■■■□□ 2.27
VPS8Q8N3P4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC29.23■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms