Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC30AQ86WT1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC30AQ86WT1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC30AQ86WT1 AC008556.1-201ENST00000610908 2040 ntBASIC19.88■□□□□ 0.77
TTC30AQ86WT1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC30AQ86WT1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC30AQ86WT1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC30AQ86WT1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC30AQ86WT1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 AC010203.1-204ENST00000548782 407 ntBASIC19.87■□□□□ 0.77
TTC30AQ86WT1 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 NTF6B-201ENST00000591913 560 ntBASIC19.87■□□□□ 0.77
TTC30AQ86WT1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 AL109659.2-201ENST00000606809 1674 ntBASIC19.87■□□□□ 0.77
TTC30AQ86WT1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TTC30AQ86WT1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 MTMR9LP-203ENST00000426597 1545 ntBASIC19.86■□□□□ 0.77
TTC30AQ86WT1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 MCCD1P1-208ENST00000445732 328 ntBASIC19.86■□□□□ 0.77
TTC30AQ86WT1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 CR769767.2-201ENST00000622735 460 ntBASIC19.86■□□□□ 0.77
TTC30AQ86WT1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.86■□□□□ 0.77
TTC30AQ86WT1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.86■□□□□ 0.77
TTC30AQ86WT1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TTC30AQ86WT1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 CROCCP3-202ENST00000420820 1947 ntBASIC19.84■□□□□ 0.77
TTC30AQ86WT1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 AC036111.1-201ENST00000533973 1582 ntBASIC19.84■□□□□ 0.77
TTC30AQ86WT1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 DUX4L26-201ENST00000489078 1255 ntBASIC19.84■□□□□ 0.77
TTC30AQ86WT1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TTC30AQ86WT1 AC073508.3-201ENST00000619697 1419 ntBASIC19.84■□□□□ 0.77
TTC30AQ86WT1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms