Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 FAM197Y4-202ENST00000622692 608 ntBASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
ATPAF1Q5TC12 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 RARRES2P10-201ENST00000564312 460 ntBASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 C1QL1P1-201ENST00000568105 661 ntBASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.27■□□□□ 0.2
ATPAF1Q5TC12 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF1Q5TC12 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF1Q5TC12 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.27■□□□□ 0.19
ATPAF1Q5TC12 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF1Q5TC12 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF1Q5TC12 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ATPAF1Q5TC12 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF1Q5TC12 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
ATPAF1Q5TC12 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.27■□□□□ 0.19
ATPAF1Q5TC12 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATPAF1Q5TC12 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 AL353708.3-201ENST00000610272 989 ntBASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATPAF1Q5TC12 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms