Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 AL499627.1-201ENST00000569373 2188 ntBASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.84□□□□□ -0.35
LINC00242Q5T6M2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.35
LINC00242Q5T6M2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
LINC00242Q5T6M2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.83□□□□□ -0.35
LINC00242Q5T6M2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LINC00242Q5T6M2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 AC135776.1-201ENST00000319817 2481 ntBASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 OR6D1P-202ENST00000641007 5290 ntBASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 AC091874.3-201ENST00000512672 1195 ntBASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 AL160286.2-201ENST00000567150 934 ntBASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 AC092118.2-201ENST00000613495 667 ntBASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LINC00242Q5T6M2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 RCC2P6-201ENST00000526625 1557 ntBASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 AC120498.8-201ENST00000614275 531 ntBASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 HLA-B-256ENST00000639848 1089 ntBASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 MTMR9LP-203ENST00000426597 1545 ntBASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC00242Q5T6M2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00242Q5T6M2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms