Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 AC126763.1-201ENST00000552015 2118 ntBASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 AC005082.1-201ENST00000413042 2259 ntBASIC19.71■□□□□ 0.75
PTPN20Q4JDL3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 AC009113.1-201ENST00000570267 2443 ntBASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 MIR564-202ENST00000385049 94 ntBASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 MIR3180-5-201ENST00000583743 153 ntBASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 FAM87A-204ENST00000613235 858 ntBASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 AC010653.2-201ENST00000623505 997 ntBASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN20Q4JDL3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 CR769767.2-201ENST00000622735 460 ntBASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN20Q4JDL3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms