Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CHRFAM7AQ494W8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 CROCCP3-202ENST00000420820 1947 ntBASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRFAM7AQ494W8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 AL161938.1-201ENST00000569833 2180 ntBASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 LIN28AP1-201ENST00000429574 405 ntBASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 SLC25A3P1-201ENST00000443844 931 ntBASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRFAM7AQ494W8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 ATP5G1P1-201ENST00000448724 379 ntBASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 AL121906.2-201ENST00000621597 723 ntBASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CHRFAM7AQ494W8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms