Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.49■□□□□ 0.71
IRX4P78413 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IRX4P78413 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.48■□□□□ 0.71
IRX4P78413 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
IRX4P78413 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
IRX4P78413 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.48■□□□□ 0.71
IRX4P78413 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.48■□□□□ 0.71
IRX4P78413 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
IRX4P78413 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.48■□□□□ 0.71
IRX4P78413 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 LINC01465-201ENST00000408887 1940 ntBASIC19.48■□□□□ 0.71
IRX4P78413 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
IRX4P78413 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
IRX4P78413 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
IRX4P78413 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 BCL2-203ENST00000589955 5011 ntBASIC19.48■□□□□ 0.71
IRX4P78413 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
IRX4P78413 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
IRX4P78413 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 LETM1P2-201ENST00000597330 2178 ntBASIC19.47■□□□□ 0.71
IRX4P78413 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
IRX4P78413 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 AP006587.1-201ENST00000534129 1502 ntBASIC19.47■□□□□ 0.71
IRX4P78413 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.47■□□□□ 0.71
IRX4P78413 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.47■□□□□ 0.71
IRX4P78413 KRT18P56-201ENST00000507275 550 ntBASIC19.47■□□□□ 0.71
IRX4P78413 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.47■□□□□ 0.71
IRX4P78413 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.47■□□□□ 0.71
IRX4P78413 AL121894.2-201ENST00000602977 491 ntBASIC19.47■□□□□ 0.71
IRX4P78413 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.47■□□□□ 0.71
IRX4P78413 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
IRX4P78413 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.47■□□□□ 0.71
IRX4P78413 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
IRX4P78413 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IRX4P78413 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX4P78413 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IRX4P78413 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
IRX4P78413 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX4P78413 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.46■□□□□ 0.71
IRX4P78413 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX4P78413 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
IRX4P78413 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
IRX4P78413 AC091390.4-202ENST00000476426 537 ntBASIC19.46■□□□□ 0.71
IRX4P78413 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.46■□□□□ 0.71
IRX4P78413 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.46■□□□□ 0.71
IRX4P78413 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
IRX4P78413 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.46■□□□□ 0.71
IRX4P78413 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.46■□□□□ 0.71
IRX4P78413 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX4P78413 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX4P78413 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
IRX4P78413 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.46■□□□□ 0.71
IRX4P78413 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
IRX4P78413 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX4P78413 AC026471.1-201ENST00000564629 3026 ntBASIC19.46■□□□□ 0.71
IRX4P78413 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX4P78413 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX4P78413 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
IRX4P78413 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
IRX4P78413 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
IRX4P78413 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
IRX4P78413 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 AL031133.1-201ENST00000406807 723 ntBASIC19.45■□□□□ 0.7
IRX4P78413 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
IRX4P78413 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
IRX4P78413 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms