Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.02■□□□□ 0.96
TPM4P67936 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TPM4P67936 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TPM4P67936 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM4P67936 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.02■□□□□ 0.96
TPM4P67936 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.02■□□□□ 0.96
TPM4P67936 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM4P67936 AL121829.2-201ENST00000620908 328 ntBASIC21.02■□□□□ 0.96
TPM4P67936 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.02■□□□□ 0.96
TPM4P67936 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TPM4P67936 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TPM4P67936 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TPM4P67936 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TPM4P67936 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TPM4P67936 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.02■□□□□ 0.95
TPM4P67936 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.01■□□□□ 0.95
TPM4P67936 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.01■□□□□ 0.95
TPM4P67936 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.01■□□□□ 0.95
TPM4P67936 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.01■□□□□ 0.95
TPM4P67936 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TPM4P67936 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21■□□□□ 0.95
TPM4P67936 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21■□□□□ 0.95
TPM4P67936 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21■□□□□ 0.95
TPM4P67936 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21■□□□□ 0.95
TPM4P67936 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TPM4P67936 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21■□□□□ 0.95
TPM4P67936 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21■□□□□ 0.95
TPM4P67936 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 MIPEPP3-201ENST00000412105 444 ntBASIC21■□□□□ 0.95
TPM4P67936 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21■□□□□ 0.95
TPM4P67936 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21■□□□□ 0.95
TPM4P67936 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21■□□□□ 0.95
TPM4P67936 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21■□□□□ 0.95
TPM4P67936 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TPM4P67936 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21■□□□□ 0.95
TPM4P67936 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TPM4P67936 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.99■□□□□ 0.95
TPM4P67936 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM4P67936 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TPM4P67936 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM4P67936 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM4P67936 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM4P67936 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM4P67936 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
TPM4P67936 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
TPM4P67936 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM4P67936 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TPM4P67936 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TPM4P67936 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM4P67936 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.99■□□□□ 0.95
TPM4P67936 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TPM4P67936 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM4P67936 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.99■□□□□ 0.95
TPM4P67936 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.99■□□□□ 0.95
TPM4P67936 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
TPM4P67936 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.99■□□□□ 0.95
TPM4P67936 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM4P67936 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
TPM4P67936 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
TPM4P67936 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TPM4P67936 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.98■□□□□ 0.95
TPM4P67936 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.98■□□□□ 0.95
TPM4P67936 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM4P67936 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.98■□□□□ 0.95
TPM4P67936 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM4P67936 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TPM4P67936 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TPM4P67936 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.98■□□□□ 0.95
TPM4P67936 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TPM4P67936 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.98■□□□□ 0.95
TPM4P67936 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TPM4P67936 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.98■□□□□ 0.95
TPM4P67936 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.98■□□□□ 0.95
TPM4P67936 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms