Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.27□□□□□ -0.29
RPL39P62891 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 AC007322.1-201ENST00000426983 750 ntBASIC13.27□□□□□ -0.29
RPL39P62891 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.27□□□□□ -0.29
RPL39P62891 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RPL39P62891 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.27□□□□□ -0.29
RPL39P62891 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.27□□□□□ -0.29
RPL39P62891 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
RPL39P62891 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.27□□□□□ -0.29
RPL39P62891 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RPL39P62891 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.27□□□□□ -0.29
RPL39P62891 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
RPL39P62891 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.27□□□□□ -0.29
RPL39P62891 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.27□□□□□ -0.29
RPL39P62891 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.27□□□□□ -0.29
RPL39P62891 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RPL39P62891 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RPL39P62891 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.27□□□□□ -0.29
RPL39P62891 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RPL39P62891 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
RPL39P62891 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.26□□□□□ -0.29
RPL39P62891 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RPL39P62891 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RPL39P62891 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.26□□□□□ -0.29
RPL39P62891 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC13.26□□□□□ -0.29
RPL39P62891 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RPL39P62891 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.26□□□□□ -0.29
RPL39P62891 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.26□□□□□ -0.29
RPL39P62891 RPS2P52-201ENST00000469610 820 ntBASIC13.26□□□□□ -0.29
RPL39P62891 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.26□□□□□ -0.29
RPL39P62891 AC005829.2-201ENST00000571422 1056 ntBASIC13.26□□□□□ -0.29
RPL39P62891 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.26□□□□□ -0.29
RPL39P62891 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.26□□□□□ -0.29
RPL39P62891 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
RPL39P62891 AC231657.2-201ENST00000624556 255 ntBASIC13.26□□□□□ -0.29
RPL39P62891 PARP1-210ENST00000629232 477 ntTSL 5 BASIC13.26□□□□□ -0.29
RPL39P62891 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
RPL39P62891 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RPL39P62891 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RPL39P62891 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.26□□□□□ -0.29
RPL39P62891 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 AL499627.1-201ENST00000569373 2188 ntBASIC13.25□□□□□ -0.29
RPL39P62891 LINC00896-202ENST00000609602 2128 ntBASIC13.25□□□□□ -0.29
RPL39P62891 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.25□□□□□ -0.29
RPL39P62891 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RPL39P62891 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
RPL39P62891 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.25□□□□□ -0.29
RPL39P62891 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.25□□□□□ -0.29
RPL39P62891 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.25□□□□□ -0.29
RPL39P62891 AL512625.2-201ENST00000417533 625 ntBASIC13.25□□□□□ -0.29
RPL39P62891 AC073210.2-201ENST00000430369 194 ntBASIC13.25□□□□□ -0.29
RPL39P62891 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.25□□□□□ -0.29
RPL39P62891 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.25□□□□□ -0.29
RPL39P62891 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.25□□□□□ -0.29
RPL39P62891 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RPL39P62891 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.25□□□□□ -0.29
RPL39P62891 AC006557.6-201ENST00000623071 864 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms