Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PER3P56645 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.34■□□□□ 0.37
PER3P56645 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.34■□□□□ 0.37
PER3P56645 AC007663.1-201ENST00000438948 1240 ntBASIC17.34■□□□□ 0.37
PER3P56645 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.34■□□□□ 0.37
PER3P56645 AL671277.2-201ENST00000458060 996 ntBASIC17.34■□□□□ 0.37
PER3P56645 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 FAM86EP-206ENST00000510506 987 ntBASIC17.34■□□□□ 0.37
PER3P56645 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PER3P56645 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.34■□□□□ 0.37
PER3P56645 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.34■□□□□ 0.37
PER3P56645 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.34■□□□□ 0.37
PER3P56645 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PER3P56645 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.33■□□□□ 0.37
PER3P56645 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PER3P56645 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PER3P56645 AL512408.1-201ENST00000569378 2000 ntBASIC17.33■□□□□ 0.37
PER3P56645 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.33■□□□□ 0.37
PER3P56645 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PER3P56645 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.33■□□□□ 0.37
PER3P56645 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PER3P56645 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.33■□□□□ 0.37
PER3P56645 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PER3P56645 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PER3P56645 KRT8P8-201ENST00000434750 1448 ntBASIC17.33■□□□□ 0.36
PER3P56645 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PER3P56645 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PER3P56645 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PER3P56645 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.33■□□□□ 0.36
PER3P56645 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
PER3P56645 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PER3P56645 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.33■□□□□ 0.36
PER3P56645 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.33■□□□□ 0.36
PER3P56645 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.33■□□□□ 0.36
PER3P56645 AC069148.1-201ENST00000608741 768 ntBASIC17.33■□□□□ 0.36
PER3P56645 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.33■□□□□ 0.36
PER3P56645 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.33■□□□□ 0.36
PER3P56645 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.33■□□□□ 0.36
PER3P56645 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
PER3P56645 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PER3P56645 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PER3P56645 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PER3P56645 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PER3P56645 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.33■□□□□ 0.36
PER3P56645 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.33■□□□□ 0.36
PER3P56645 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PER3P56645 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.33■□□□□ 0.36
PER3P56645 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.32■□□□□ 0.36
PER3P56645 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PER3P56645 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.32■□□□□ 0.36
PER3P56645 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PER3P56645 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.32■□□□□ 0.36
PER3P56645 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
PER3P56645 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 DUSP5P1-201ENST00000441325 1139 ntBASIC17.32■□□□□ 0.36
PER3P56645 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.32■□□□□ 0.36
PER3P56645 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.32■□□□□ 0.36
PER3P56645 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.32■□□□□ 0.36
PER3P56645 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.32■□□□□ 0.36
PER3P56645 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 AC011558.1-201ENST00000623459 338 ntBASIC17.32■□□□□ 0.36
PER3P56645 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.32■□□□□ 0.36
PER3P56645 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.32■□□□□ 0.36
PER3P56645 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PER3P56645 AL049812.1-201ENST00000432563 2267 ntBASIC17.32■□□□□ 0.36
PER3P56645 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.32■□□□□ 0.36
PER3P56645 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.32■□□□□ 0.36
PER3P56645 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PER3P56645 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PER3P56645 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PER3P56645 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.31■□□□□ 0.36
PER3P56645 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PER3P56645 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PER3P56645 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms