Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.65■□□□□ 0.9
PMS1P54277 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PMS1P54277 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS1P54277 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS1P54277 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.65■□□□□ 0.9
PMS1P54277 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS1P54277 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.65■□□□□ 0.9
PMS1P54277 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS1P54277 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS1P54277 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS1P54277 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS1P54277 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.65■□□□□ 0.9
PMS1P54277 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PMS1P54277 RPS2P55-201ENST00000397318 883 ntBASIC20.65■□□□□ 0.9
PMS1P54277 AC107956.1-201ENST00000494359 873 ntBASIC20.65■□□□□ 0.9
PMS1P54277 AC116562.2-201ENST00000507042 360 ntBASIC20.65■□□□□ 0.9
PMS1P54277 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.65■□□□□ 0.9
PMS1P54277 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PMS1P54277 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PMS1P54277 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.65■□□□□ 0.9
PMS1P54277 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.65■□□□□ 0.9
PMS1P54277 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.64■□□□□ 0.9
PMS1P54277 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.64■□□□□ 0.9
PMS1P54277 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
PMS1P54277 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PMS1P54277 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PMS1P54277 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PMS1P54277 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
PMS1P54277 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.64■□□□□ 0.9
PMS1P54277 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
PMS1P54277 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 NUDT16P1-203ENST00000513809 620 ntBASIC20.64■□□□□ 0.89
PMS1P54277 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.64■□□□□ 0.89
PMS1P54277 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PMS1P54277 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.64■□□□□ 0.89
PMS1P54277 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.64■□□□□ 0.89
PMS1P54277 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.64■□□□□ 0.89
PMS1P54277 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PMS1P54277 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PMS1P54277 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PMS1P54277 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.63■□□□□ 0.89
PMS1P54277 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.63■□□□□ 0.89
PMS1P54277 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PMS1P54277 AC096733.2-201ENST00000609937 1394 ntBASIC20.63■□□□□ 0.89
PMS1P54277 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.63■□□□□ 0.89
PMS1P54277 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.63■□□□□ 0.89
PMS1P54277 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PMS1P54277 AL133373.2-201ENST00000623187 2828 ntBASIC20.63■□□□□ 0.89
PMS1P54277 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.63■□□□□ 0.89
PMS1P54277 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.63■□□□□ 0.89
PMS1P54277 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
PMS1P54277 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.63■□□□□ 0.89
PMS1P54277 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.63■□□□□ 0.89
PMS1P54277 AC008556.1-201ENST00000610908 2040 ntBASIC20.63■□□□□ 0.89
PMS1P54277 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PMS1P54277 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.63■□□□□ 0.89
PMS1P54277 AL135905.2-201ENST00000584934 1404 ntBASIC20.62■□□□□ 0.89
PMS1P54277 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS1P54277 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS1P54277 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PMS1P54277 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PMS1P54277 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS1P54277 UBE2SP1-201ENST00000450587 669 ntBASIC20.62■□□□□ 0.89
PMS1P54277 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS1P54277 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.62■□□□□ 0.89
PMS1P54277 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.62■□□□□ 0.89
PMS1P54277 AC233702.5-201ENST00000584107 538 ntBASIC20.62■□□□□ 0.89
PMS1P54277 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
PMS1P54277 Z99916.2-201ENST00000604037 246 ntBASIC20.62■□□□□ 0.89
PMS1P54277 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.62■□□□□ 0.89
PMS1P54277 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS1P54277 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
PMS1P54277 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS1P54277 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PMS1P54277 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms