Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC6A12P48065 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
SLC6A12P48065 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC6A12P48065 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC6A12P48065 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC6A12P48065 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLC6A12P48065 MIR564-202ENST00000385049 94 ntBASIC18.1■□□□□ 0.49
SLC6A12P48065 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC6A12P48065 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC6A12P48065 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC6A12P48065 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC6A12P48065 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A12P48065 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC6A12P48065 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC6A12P48065 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC6A12P48065 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC6A12P48065 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC6A12P48065 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC6A12P48065 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC6A12P48065 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC6A12P48065 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC6A12P48065 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 MIR1238-201ENST00000408483 83 ntBASIC18.09■□□□□ 0.49
SLC6A12P48065 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC6A12P48065 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC6A12P48065 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC6A12P48065 TSPY15P-201ENST00000457163 923 ntBASIC18.09■□□□□ 0.49
SLC6A12P48065 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC6A12P48065 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC6A12P48065 AL353719.1-201ENST00000566847 864 ntBASIC18.09■□□□□ 0.49
SLC6A12P48065 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.09■□□□□ 0.49
SLC6A12P48065 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC6A12P48065 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.09■□□□□ 0.49
SLC6A12P48065 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SLC6A12P48065 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A12P48065 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC6A12P48065 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
SLC6A12P48065 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.08■□□□□ 0.49
SLC6A12P48065 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC6A12P48065 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SLC6A12P48065 AC092338.2-201ENST00000568827 1415 ntBASIC18.08■□□□□ 0.49
SLC6A12P48065 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC6A12P48065 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC6A12P48065 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC6A12P48065 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SLC6A12P48065 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC6A12P48065 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
SLC6A12P48065 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC6A12P48065 TSPY17P-201ENST00000450329 467 ntBASIC18.08■□□□□ 0.48
SLC6A12P48065 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SLC6A12P48065 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC6A12P48065 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A12P48065 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A12P48065 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC6A12P48065 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC6A12P48065 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC6A12P48065 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLC6A12P48065 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC6A12P48065 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SLC6A12P48065 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC6A12P48065 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A12P48065 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A12P48065 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A12P48065 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLC6A12P48065 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC6A12P48065 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.07■□□□□ 0.48
SLC6A12P48065 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SLC6A12P48065 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SLC6A12P48065 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.07■□□□□ 0.48
SLC6A12P48065 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A12P48065 AP003041.3-201ENST00000527151 707 ntBASIC18.07■□□□□ 0.48
SLC6A12P48065 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC6A12P48065 MIR3180-5-201ENST00000583743 153 ntBASIC18.07■□□□□ 0.48
SLC6A12P48065 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.07■□□□□ 0.48
SLC6A12P48065 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC6A12P48065 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC6A12P48065 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC6A12P48065 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms