Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPNS1P04632 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPNS1P04632 AL390961.4-201ENST00000623958 2535 ntBASIC18.67■□□□□ 0.58
CAPNS1P04632 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CAPNS1P04632 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPNS1P04632 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPNS1P04632 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPNS1P04632 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPNS1P04632 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CAPNS1P04632 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CAPNS1P04632 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 KRT8P36-201ENST00000489121 1440 ntBASIC18.66■□□□□ 0.58
CAPNS1P04632 AC092338.2-201ENST00000568827 1415 ntBASIC18.66■□□□□ 0.58
CAPNS1P04632 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CAPNS1P04632 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPNS1P04632 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPNS1P04632 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CAPNS1P04632 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPNS1P04632 AP000593.1-201ENST00000393668 712 ntBASIC18.66■□□□□ 0.58
CAPNS1P04632 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CAPNS1P04632 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.66■□□□□ 0.58
CAPNS1P04632 KRT17P6-201ENST00000453795 1220 ntBASIC18.66■□□□□ 0.58
CAPNS1P04632 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPNS1P04632 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPNS1P04632 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPNS1P04632 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.66■□□□□ 0.58
CAPNS1P04632 AC008622.2-201ENST00000617006 1229 ntBASIC18.66■□□□□ 0.58
CAPNS1P04632 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPNS1P04632 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CAPNS1P04632 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPNS1P04632 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPNS1P04632 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPNS1P04632 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPNS1P04632 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPNS1P04632 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPNS1P04632 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPNS1P04632 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPNS1P04632 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPNS1P04632 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPNS1P04632 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPNS1P04632 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPNS1P04632 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPNS1P04632 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPNS1P04632 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPNS1P04632 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPNS1P04632 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPNS1P04632 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.65■□□□□ 0.58
CAPNS1P04632 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPNS1P04632 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPNS1P04632 CCR12P-201ENST00000446203 998 ntBASIC18.65■□□□□ 0.58
CAPNS1P04632 KRT18P38-201ENST00000449496 1282 ntBASIC18.65■□□□□ 0.58
CAPNS1P04632 AC008040.2-201ENST00000461049 708 ntBASIC18.65■□□□□ 0.58
CAPNS1P04632 AL359075.1-203ENST00000462729 1002 ntBASIC18.65■□□□□ 0.58
CAPNS1P04632 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPNS1P04632 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPNS1P04632 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CAPNS1P04632 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.65■□□□□ 0.58
CAPNS1P04632 AL441883.1-201ENST00000566170 1045 ntBASIC18.65■□□□□ 0.58
CAPNS1P04632 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.65■□□□□ 0.58
CAPNS1P04632 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPNS1P04632 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.65■□□□□ 0.58
CAPNS1P04632 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPNS1P04632 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CAPNS1P04632 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPNS1P04632 AC096733.2-201ENST00000609937 1394 ntBASIC18.65■□□□□ 0.58
CAPNS1P04632 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAPNS1P04632 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPNS1P04632 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPNS1P04632 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CAPNS1P04632 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.64■□□□□ 0.58
CAPNS1P04632 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CAPNS1P04632 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CAPNS1P04632 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CAPNS1P04632 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPNS1P04632 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPNS1P04632 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPNS1P04632 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPNS1P04632 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.64■□□□□ 0.57
CAPNS1P04632 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CAPNS1P04632 AL023803.3-201ENST00000615559 522 ntBASIC18.64■□□□□ 0.57
CAPNS1P04632 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPNS1P04632 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CAPNS1P04632 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CAPNS1P04632 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPNS1P04632 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.64■□□□□ 0.57
CAPNS1P04632 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms