Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 AL645929.1-201ENST00000420084 975 ntBASIC18.57■□□□□ 0.56
PCDHGA12O60330 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 RASA4DP-201ENST00000460726 1199 ntBASIC18.57■□□□□ 0.56
PCDHGA12O60330 AC012313.10-201ENST00000623509 926 ntBASIC18.57■□□□□ 0.56
PCDHGA12O60330 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA12O60330 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCDHGA12O60330 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA12O60330 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGA12O60330 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA12O60330 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGA12O60330 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGA12O60330 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.56■□□□□ 0.56
PCDHGA12O60330 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA12O60330 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA12O60330 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 AC004408.2-201ENST00000623613 2777 ntBASIC18.56■□□□□ 0.56
PCDHGA12O60330 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA12O60330 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA12O60330 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA12O60330 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA12O60330 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGA12O60330 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA12O60330 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA12O60330 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGA12O60330 MIR3652-201ENST00000579335 131 ntBASIC18.55■□□□□ 0.56
PCDHGA12O60330 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA12O60330 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA12O60330 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGA12O60330 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA12O60330 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA12O60330 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA12O60330 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA12O60330 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA12O60330 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms