Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SURF4O15260 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SURF4O15260 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SURF4O15260 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.96■□□□□ 0.3
SURF4O15260 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.96■□□□□ 0.3
SURF4O15260 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.95■□□□□ 0.3
SURF4O15260 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.95■□□□□ 0.3
SURF4O15260 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SURF4O15260 POU5F1P3-201ENST00000428824 1078 ntBASIC16.95■□□□□ 0.3
SURF4O15260 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SURF4O15260 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.95■□□□□ 0.3
SURF4O15260 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.95■□□□□ 0.3
SURF4O15260 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.95■□□□□ 0.3
SURF4O15260 AC068587.9-201ENST00000641814 219 ntBASIC16.95■□□□□ 0.3
SURF4O15260 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.95■□□□□ 0.3
SURF4O15260 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SURF4O15260 AC067852.2-201ENST00000590513 2313 ntBASIC16.95■□□□□ 0.3
SURF4O15260 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.94■□□□□ 0.3
SURF4O15260 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SURF4O15260 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SURF4O15260 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SURF4O15260 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.94■□□□□ 0.3
SURF4O15260 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.94■□□□□ 0.3
SURF4O15260 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.94■□□□□ 0.3
SURF4O15260 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SURF4O15260 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.94■□□□□ 0.3
SURF4O15260 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SURF4O15260 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.94■□□□□ 0.3
SURF4O15260 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SURF4O15260 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SURF4O15260 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.93■□□□□ 0.3
SURF4O15260 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SURF4O15260 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SURF4O15260 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SURF4O15260 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.93■□□□□ 0.3
SURF4O15260 AC004264.1-201ENST00000608354 794 ntBASIC16.93■□□□□ 0.3
SURF4O15260 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.93■□□□□ 0.3
SURF4O15260 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
SURF4O15260 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SURF4O15260 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.93■□□□□ 0.3
SURF4O15260 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.93■□□□□ 0.3
SURF4O15260 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SURF4O15260 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.93■□□□□ 0.3
SURF4O15260 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.93■□□□□ 0.3
SURF4O15260 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 AP000997.3-201ENST00000623333 2250 ntBASIC16.93■□□□□ 0.3
SURF4O15260 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.93■□□□□ 0.3
SURF4O15260 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SURF4O15260 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.92■□□□□ 0.3
SURF4O15260 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.92■□□□□ 0.3
SURF4O15260 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SURF4O15260 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SURF4O15260 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SURF4O15260 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SURF4O15260 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SURF4O15260 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms