Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 AC087623.3-201ENST00000607047 1098 ntBASIC16.36■□□□□ 0.21
SHISA3A0PJX4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 AC124067.4-201ENST00000519691 2379 ntBASIC16.36■□□□□ 0.21
SHISA3A0PJX4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SHISA3A0PJX4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 TNRC18P3-201ENST00000441896 2691 ntBASIC16.35■□□□□ 0.21
SHISA3A0PJX4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 AC092666.2-201ENST00000613287 246 ntBASIC16.35■□□□□ 0.21
SHISA3A0PJX4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SHISA3A0PJX4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.34■□□□□ 0.21
SHISA3A0PJX4 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SHISA3A0PJX4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SHISA3A0PJX4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHISA3A0PJX4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SHISA3A0PJX4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SHISA3A0PJX4 AC008556.1-201ENST00000610908 2040 ntBASIC16.33■□□□□ 0.21
SHISA3A0PJX4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 BX276092.2-201ENST00000417668 665 ntBASIC16.33■□□□□ 0.2
SHISA3A0PJX4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.33■□□□□ 0.2
SHISA3A0PJX4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms