Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 UNC93B4-201ENST00000505679 747 ntBASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 CROCCP1-201ENST00000426910 5675 ntBASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV21A0A0B4J279 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 AC073592.3-201ENST00000625118 1834 ntBASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 C1QL1P1-201ENST00000568105 661 ntBASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 HLA-A-209ENST00000638375 975 ntBASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV21A0A0B4J279 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV21A0A0B4J279 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms