Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV12-3A0A0B4J271 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 AC110285.5-201ENST00000611501 352 ntBASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 AC073648.6-201ENST00000641589 218 ntBASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV12-3A0A0B4J271 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 RN7SL471P-201ENST00000580476 299 ntBASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 PKD1P5-201ENST00000532415 10291 ntBASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV12-3A0A0B4J271 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 AC093525.10-201ENST00000625130 1569 ntBASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV12-3A0A0B4J271 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms